Files should be tab-delimited with the first 4 columns as follows:
(see right for examples)
Other columns are permissible but will be ignored.
NAVid allows users to identify genomic variants that create, alter, or destroy a NAGNAG 3' splice site and assess the proteomic consequences of that NAGNAG.
All coordinates used are based on human reference genome GRCh38/hg38. Other genomes and assemblies are not currently supported.
NAVid was developed using Shiny for Python by Halle Pearce as part of the Laederach Lab at the University of North Carolina at Chapel Hill, Department of Biology.
If you have questions or run into issues, please contact us at hpearce@unc.edu or alain@unc.edu.